Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015899022.1_cds_XP_016448957.1_43561
CDS Infomation

[gene=LOC107774026] [db_xref=GeneID:107774026] [protein=premnaspirodiene oxygenase-like] [protein_id=XP_016448957.1] [location=join(85501..86379,87022..87642)] [gbkey=CDS]
Sequence

ATGCAGTTCTTCAACTTCTTTTCCCTTTTCCTTTTTGTGTCATTCCTCTTTTTATTTAAG
AAATGGAAGAATTCCAATAGCCAAACCAAAAGATTGCCTCCAGGTCCATGGAAATTACCT
ATTCTTGGAAGCATGCTTCATATGCTAGGTGGACTTCCACATCATGTCCTTAGAGATTTA
GCCAAAAAATATGGACCAATTATGCACCTTCAACTAGGCGAAGTTTCTCTAGTTGTTATT
AGTTCTCCTGAGATGGCAAAAGAAGTACTAAAAACTCATGACCTCGCTTTTGCAAATAGG
CCTTTACTTGTAGCTGCCAAGATTTTTTCTTATAATTGCATGGACATTGCCTTTTCTCCT
TATGGCAATTACTGGAGACAAATGCGTAAAATTTGTCTCTTGGAATTGCTCAGTGCCAAA
AATGTCAAGTCATTCAACTCAATTAGACAAGATGAAGTTCATCGTATGATTAAATTTTTT
CGATCATCTCCTGGTAAGCCAGTTAATGTTACAAAAAGGATTTCACTTTTCACAAACTCT
ATGACATGTAGATCAGCATTTGGACAAGAATATAAGGAGCAAGACGAATTTGTACAACTA
GTCAAAAAAGTGTCAAACTTAATAGAAGGGTTTGATGTGGCTGATATATTCCCTTCACTG
AAGTTTCTTCATGTGCTCACTGGAATGAAGGCTAAAGTTATGAATACACACAATGAATTA
GATGCCATTCTTGAAAATATCATCAATGAGCACAAGAAGACTTCAAAAAGCGATGGTGAA
TCAGGAGGTGAAGGTATAATTGGTGTACTGCTAAGACTTATGAAAGAGGGAGGCCTTCAA
TTTCCAATCACTAACGACAACATCAAAGCTATCATTTCTGACATCTTTGGTGGGGGAACA
GAAACTTCATCAACAACAATTAATTGGGCCATGGTCGAAATGATGAAGAATCCAAGTGTA
TTTTCCAAAGCTCAAGCAGAGGTAAGAGAAATCTTGAGAGGGAAAGAAACTTTTGGTGAA
ATTGATGTCGAGGAGTTCAAATACCTAAAGATGGTCATTAAAGAAACTTTCAGACTCCAT
CCTCCAGTACCTCTTTTGCTTCCAAGAGAATGTAGAGAAGAAACGGACTTAAACGGCTAC
ACTATTCCATTGAAAACAAAAGTCGTGGTTAATGTTTGGGCAATGGGAAGAGATCCAAAA
TATTGGGATGACGTAGAAAGCTTTAAACCTGAGAGATTTGAACACAACTCTATGGATTAT
ATTGGTAATAATTATGAATATCTTCCCTTTGGTAGTGGAAGGAGAATTTGCCCCGGAATA
TCATTTGGTTTAGCAAATGTTTATTTTCCACTGGCTCAATTATTGTATCACTTTGACTGG
AAACTCCCAACTGAAATCAATCCAAGTGAATTGGACTTGACTGAGGCGGCTGGAGCAGCT
TGTGCCAGAAAGAATGACCTACACTTGATCGCAACTGCTTATCAACACTGTGAAGAGTGA

Peptide Sequence

PEP ID

XP_016448957.1
PEP Infomation

PREDICTED: premnaspirodiene oxygenase-like [Nicotiana tabacum]
Sequence

MQFFNFFSLFLFVSFLFLFKKWKNSNSQTKRLPPGPWKLPILGSMLHMLGGLPHHVLRDL
AKKYGPIMHLQLGEVSLVVISSPEMAKEVLKTHDLAFANRPLLVAAKIFSYNCMDIAFSP
YGNYWRQMRKICLLELLSAKNVKSFNSIRQDEVHRMIKFFRSSPGKPVNVTKRISLFTNS
MTCRSAFGQEYKEQDEFVQLVKKVSNLIEGFDVADIFPSLKFLHVLTGMKAKVMNTHNEL
DAILENIINEHKKTSKSDGESGGEGIIGVLLRLMKEGGLQFPITNDNIKAIISDIFGGGT
ETSSTTINWAMVEMMKNPSVFSKAQAEVREILRGKETFGEIDVEEFKYLKMVIKETFRLH
PPVPLLLPRECREETDLNGYTIPLKTKVVVNVWAMGRDPKYWDDVESFKPERFEHNSMDY
IGNNYEYLPFGSGRRICPGISFGLANVYFPLAQLLYHFDWKLPTEINPSELDLTEAAGAA
CARKNDLHLIATAYQHCEE

Transcript Sequence

Gene sequence data has not been registered.